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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847728.1_cds_XP_016510165.1_23031
CDS Infomation

[gene=LOC107827528] [db_xref=GeneID:107827528] [protein=probable sodium/metabolite cotransporter BASS1, chloroplastic] [protein_id=XP_016510165.1] [location=join(99796..100317,101746..101839,101916..101949,102060..102114,103168..103251,103338..103625,103880..104032)] [gbkey=CDS]
Sequence

ATGCAGTCGTTTCTGTCAACACCAAATACTGCAAAAATCTGTTACTTCAATCACACAAGA
TTAATACACAACAATCAATATCTCACCTCTACAAATTATCCTTTGCCCTTTTCTCCACCC
CCTATTTCACTTCACTTCTCAAACTCCTATTCACCAATTCTTGTTTTGAATCAAAAACCC
AAACCCACTTCACAAATATCCAGGTCAATAAGTAGGCCCCTTCTGTGTGCAAATTCATCA
AATGCCATTACTGCAGATGATAATAACAGCAAGAAAAGCCTCGGGGATTGGATCCAAACT
GTTGGGGAGACCATTTCTGTCTTGTTTCCCTTGTGGGTAGCTTTGGGTTGCTTAATTGGG
CTGTTCAAACCCAACTCCTTCAATTGGGTCAAACCCCAATGGACCGTGACGGGTATCACA
CTTACGATGCTTGGCATGGGAATGACTCTTACTTTTGATGACCTTCGTTCTGCTTTAGCT
ATGCCTAAACAGTTATTCTGCGGTTTCATCCTTCAGTACTCGGTGATGCCTTTATCAGGG
TATTTTATTAGCAAGCTGTTAAATTTGCCATCCCATTATGCAGCAGGCTTGATATTGGTT
GGCTGCTGTCCTGGAGGGACGGCAAGTAATATTGTCACTTACATTGCACGTGGCAATGTG
GCGCTTTCAGTATTGATGACTGCTGCAAGTACCCTATCTGCTGTGGTGATGACCCCTTTC
CTAACAGAGAAACTTGCAGGGCAATTTGTTGCAGTAGATGCAGCTGGACTTTTCATGTCC
ACTTTGCAGGTGGTTCTTCTTCCTGTCTTAGCTGGTGCATTTCTGAATCAGTATTTCAAA
AGCCTTGTCAAAATTGTGTCTCCATTGATGCCCCCTATTGCTGTAGCAACTGTTGCAGTT
CTTTGTGGAAATGCAATTGCGCAGAGTTCTTCTGCAATCCTCATGTCAGGTCAACAGGTT
GTCTTAGCTGCTGCCCTTCTTCATGCATCTGGCTTCTTCTTTGGCTACGTGCTCTCAAGG
ATGCTTGGGGTTGATGTATCGTCCTCAAGGACAATATCTATTGAAGTCGGCATGCAGAAC
TCGGTTCTTGGAGTAGTTCTAGCCACTCAGCACTTTGGTAATCCACTTACTGCAGTACCA
TGTGCAGTTTCTAGTGTTTGTCACTCAATATTTGGCAGTGCCTTGGCTGGTATCTGGAGG
CGTTCTGTTCCAGATCAAGTGCAGCAGTGA

Peptide Sequence

PEP ID

XP_016510165.1
PEP Infomation

PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Nicotiana tabacum]
Sequence

MQSFLSTPNTAKICYFNHTRLIHNNQYLTSTNYPLPFSPPPISLHFSNSYSPILVLNQKP
KPTSQISRSISRPLLCANSSNAITADDNNSKKSLGDWIQTVGETISVLFPLWVALGCLIG
LFKPNSFNWVKPQWTVTGITLTMLGMGMTLTFDDLRSALAMPKQLFCGFILQYSVMPLSG
YFISKLLNLPSHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTLSAVVMTPF
LTEKLAGQFVAVDAAGLFMSTLQVVLLPVLAGAFLNQYFKSLVKIVSPLMPPIAVATVAV
LCGNAIAQSSSAILMSGQQVVLAAALLHASGFFFGYVLSRMLGVDVSSSRTISIEVGMQN
SVLGVVLATQHFGNPLTAVPCAVSSVCHSIFGSALAGIWRRSVPDQVQQ

Transcript Sequence

Gene sequence data has not been registered.